Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | PFL_RS30005 | Not Available | + | 6731870 - 6732511 | 23559.0 |
| abc transporter permease subunit | PFL_RS30010 | Not Available | - | 6732660 - 6733550 | 32299.3 |
| abc transporter permease subunit | PFL_RS30015 | Not Available | - | 6733547 - 6734428 | 32719.2 |
| abc transporter atp-binding protein | PFL_RS30020 | Not Available | - | 6734464 - 6735606 | 42249.2 |
| polyamine abc transporter substrate-binding protein | PFL_RS30025 | Not Available | - | 6735678 - 6736772 | 40006.9 |
| polyamine abc transporter substrate-binding protein | PFL_RS30030 | Not Available | - | 6736962 - 6738059 | 39655.4 |
| aspartate aminotransferase family protein | PFL_RS30035 | Not Available | - | 6738244 - 6739608 | 50087.4 |
| glutamine synthetase family protein | PFL_RS30040 | Not Available | - | 6739665 - 6741023 | 51089.9 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | PFL_RS30045 | Not Available | - | 6741062 - 6741844 | 27476.7 |
| glutamine synthetase family protein | PFL_RS30050 | Not Available | + | 6742123 - 6743499 | 51003.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


