Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-amp cyclohydrolase | PFL_RS02160 | Not Available | - | 487854 - 488246 | 15007.0 |
| ubiquinone biosynthesis regulatory protein kinase ubib | PFL_RS02165 | Not Available | - | 488327 - 489931 | 61266.0 |
| scp2 domain-containing protein | PFL_RS02170 | Not Available | - | 489928 - 490551 | 23044.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | PFL_RS02175 | Not Available | - | 490551 - 491321 | 28385.3 |
| polyhydroxyalkanoic acid system family protein | PFL_RS02180 | Not Available | + | 491477 - 491752 | 9816.95 |
| phasin family protein | PFL_RS02185 | Not Available | + | 491876 - 492298 | 15251.5 |
| phasin family protein | PFL_RS02190 | Not Available | + | 492309 - 493181 | 28967.0 |
| tetr/acrr family transcriptional regulator | PFL_RS02195 | Not Available | - | 493243 - 493863 | 23474.9 |
| class ii poly(r)-hydroxyalkanoic acid synthase | PFL_RS02200 | Not Available | - | 493929 - 495611 | 62619.3 |
| poly(3-hydroxyalkanoate) depolymerase | PFL_RS02205 | Not Available | - | 495720 - 496580 | 31841.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


