Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PFL_RS29855 | Not Available | - | 6700611 - 6701474 | 31818.7 |
| heavy metal translocating p-type atpase | PFL_RS29860 | Not Available | - | 6701491 - 6703830 | 82788.0 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | PFL_RS29865 | Not Available | + | 6703919 - 6704368 | 16953.1 |
| undecaprenyl-diphosphatase | PFL_RS29870 | Not Available | - | 6704384 - 6704971 | 21381.0 |
| thymidylate synthase | PFL_RS29875 | Not Available | - | 6705148 - 6706119 | 36547.7 |
| prolipoprotein diacylglyceryl transferase | PFL_RS29880 | Not Available | - | 6706166 - 6706975 | 30336.8 |
| sulfite exporter taue/safe family protein | PFL_RS29885 | Not Available | - | 6707057 - 6707839 | 27178.4 |
| nrde family protein | PFL_RS29890 | Not Available | + | 6707963 - 6708709 | 26928.1 |
| phosphoenolpyruvate--protein phosphotransferase | PFL_RS29895 | Not Available | - | 6708783 - 6711062 | 83436.5 |
| rna pyrophosphohydrolase | PFL_RS29900 | Not Available | - | 6711085 - 6711564 | 18863.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


