Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | PFL_RS29755 | Not Available | - | 6675434 - 6676246 | 30094.9 |
| class i sam-dependent rrna methyltransferase | PFL_RS29760 | Not Available | + | 6676474 - 6677670 | 43830.9 |
| sagb family peptide dehydrogenase | PFL_RS29765 | Not Available | + | 6678088 - 6679167 | 40707.0 |
| diiron oxygenase | PFL_RS29770 | Not Available | + | 6679167 - 6680144 | 36825.9 |
| multidrug effflux mfs transporter | PFL_RS29775 | Not Available | + | 6680137 - 6681348 | 42790.5 |
| hypothetical protein | PFL_RS29780 | Not Available | - | 6681379 - 6681948 | 20480.8 |
| dihydroxy-acid dehydratase | PFL_RS29785 | Not Available | + | 6682250 - 6684091 | 65682.4 |
| sgnh/gdsl hydrolase family protein | PFL_RS29790 | Not Available | - | 6684305 - 6685528 | 44271.2 |
| sgnh family hydrolase | PFL_RS29795 | Not Available | - | 6685531 - 6686661 | 41454.6 |
| mboat family protein | PFL_RS29800 | Not Available | - | 6686648 - 6688048 | 51905.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


