Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf167 domain-containing protein | PFL_RS29605 | Not Available | + | 6649218 - 6649511 | 10704.0 |
| homoserine o-acetyltransferase | PFL_RS29610 | Not Available | + | 6649675 - 6650814 | 41722.4 |
| methionine biosynthesis protein metw | PFL_RS29615 | Not Available | + | 6650822 - 6651442 | 23629.2 |
| duf4426 domain-containing protein | PFL_RS29620 | Not Available | + | 6651469 - 6651903 | 15830.8 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | PFL_RS29625 | Not Available | + | 6651900 - 6652496 | 21172.4 |
| radical sam family heme chaperone hemw | PFL_RS29630 | Not Available | + | 6652493 - 6653695 | 44213.6 |
| duf3392 domain-containing protein | PFL_RS29635 | Not Available | + | 6653705 - 6654028 | 11461.6 |
| rna 2'-phosphotransferase | PFL_RS29640 | Not Available | + | 6654116 - 6654664 | 20133.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | PFL_RS29645 | Not Available | - | 6654758 - 6655483 | 27119.6 |
| thiazole synthase | PFL_RS29650 | Not Available | - | 6655493 - 6656287 | 28306.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


