Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | PFL_RS29555 | Not Available | + | 6640969 - 6641406 | 15903.1 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | PFL_RS29560 | Not Available | + | 6641522 - 6642028 | 18067.8 |
| aspartate carbamoyltransferase catalytic subunit | PFL_RS29565 | Not Available | + | 6642054 - 6643058 | 36418.3 |
| dihydroorotase | PFL_RS29570 | Not Available | + | 6643055 - 6644326 | 43857.6 |
| tm2 domain-containing protein | PFL_RS29575 | Not Available | - | 6644454 - 6644873 | 16069.5 |
| c40 family peptidase | PFL_RS29580 | Not Available | + | 6645124 - 6645747 | 23106.1 |
| type iv pilus twitching motility protein pilt | PFL_RS29585 | Not Available | - | 6645826 - 6646860 | 37391.5 |
| yggs family pyridoxal phosphate-dependent enzyme | PFL_RS29590 | Not Available | + | 6647051 - 6647749 | 25083.9 |
| pyrroline-5-carboxylate reductase | PFL_RS29595 | Not Available | + | 6647784 - 6648602 | 28190.9 |
| yggt family protein | PFL_RS29600 | Not Available | + | 6648613 - 6649203 | 21545.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


