Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucans biosynthesis glucosyltransferase mdoh | PFL_RS02110 | Not Available | + | 477683 - 480253 | 96399.0 |
| transporter substrate-binding domain-containing protein | PFL_RS02115 | Not Available | + | 480513 - 481310 | 29563.8 |
| amino acid abc transporter permease | PFL_RS02120 | Not Available | + | 481456 - 482418 | 34908.5 |
| amino acid abc transporter atp-binding protein | PFL_RS02125 | Not Available | + | 482411 - 483145 | 27010.9 |
| methyl-accepting chemotaxis protein | PFL_RS02130 | Not Available | - | 483195 - 485111 | 68223.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | PFL_RS02135 | Not Available | - | 485249 - 485956 | 26016.2 |
| twin-arginine translocase subunit tatc | PFL_RS02140 | Not Available | - | 485953 - 486747 | 29402.9 |
| sec-independent protein translocase protein tatb | PFL_RS02145 | Not Available | - | 486744 - 487202 | 15965.2 |
| twin-arginine translocase tata/tate family subunit | PFL_RS02150 | Not Available | - | 487213 - 487494 | 10276.5 |
| phosphoribosyl-atp diphosphatase | PFL_RS02155 | Not Available | - | 487520 - 487852 | 11987.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


