Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative repressor protein | PFL_RS10025 | Not Available | - | 2213809 - 2214522 | 26144.5 |
| Hypothetical protein | PFL_RS31895 | Not Available | + | 2214599 - 2214871 | 9740.49 |
| Gp14 | PFL_RS10030 | Not Available | + | 2215220 - 2215738 | 18873.4 |
| Trar/dksa family transcriptional regulator | PFL_RS10035 | Not Available | + | 2215731 - 2215955 | 8305.01 |
| Primase | PFL_RS10040 | Not Available | + | 2215948 - 2218167 | 82961.2 |
| hypothetical protein | PFL_RS10045 | Not Available | + | 2218160 - 2218525 | 13481.8 |
| phage holin family protein | PFL_RS10050 | Not Available | + | 2219046 - 2219390 | 11989.0 |
| hypothetical protein | PFL_RS10055 | Not Available | + | 2219596 - 2220168 | 20879.7 |
| Large terminase subunit | PFL_RS10060 | Not Available | + | 2220173 - 2222185 | 75307.9 |
| Putative peptidase b | PFL_RS10065 | Not Available | + | 2222187 - 2222393 | 7601.11 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


