Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf924 family protein | PFL_RS02010 | Not Available | + | 454095 - 454697 | 22746.1 |
| methyl-accepting chemotaxis protein | PFL_RS02015 | Not Available | - | 454734 - 456626 | 67301.0 |
| hypothetical protein | PFL_RS02020 | Not Available | + | 456909 - 457163 | 8912.87 |
| lipocalin family protein | PFL_RS02025 | Not Available | + | 457199 - 457768 | 21818.1 |
| formimidoylglutamate deiminase | PFL_RS02030 | Not Available | - | 457850 - 459214 | 50005.2 |
| histidine utilization repressor | PFL_RS02035 | Not Available | + | 459322 - 460071 | 27955.6 |
| hutd family protein | PFL_RS02040 | Not Available | + | 460068 - 460640 | 20792.8 |
| urocanate hydratase | PFL_RS02045 | Not Available | + | 461045 - 462727 | 61321.0 |
| cytosine permease | PFL_RS02050 | Not Available | + | 462857 - 464326 | 52210.3 |
| abc transporter substrate-binding protein | PFL_RS02055 | Not Available | + | 464402 - 465367 | 35148.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


