Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS01810 | Not Available | + | 407509 - 407967 | 16262.5 |
| phosphomannomutase/phosphoglucomutase | PFL_RS31730 | Not Available | - | 408347 - 408673 | 12317.4 |
| Trna-phe | Not Available | Not Available | + | 408994 - 409069 | Not Available |
| oxidative damage protection protein | PFL_RS01825 | Not Available | - | 409175 - 409447 | 10483.4 |
| a/g-specific adenine glycosylase | PFL_RS01830 | Not Available | - | 409444 - 410511 | 39869.2 |
| asma family protein | PFL_RS01835 | Not Available | - | 410508 - 412733 | 79827.4 |
| ofa family mfs transporter | PFL_RS01840 | Not Available | + | 413076 - 414737 | 58829.9 |
| imidazoleglycerol-phosphate dehydratase hisb | PFL_RS01845 | Not Available | + | 414975 - 415568 | 21891.2 |
| imidazole glycerol phosphate synthase subunit hish | PFL_RS01850 | Not Available | + | 415568 - 416206 | 23367.9 |
| duf2164 domain-containing protein | PFL_RS01855 | Not Available | + | 416207 - 416467 | 10105.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


