Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gaba permease | PFL_RS01760 | Not Available | + | 397448 - 398839 | 49529.6 |
| dknyy domain-containing protein | PFL_RS01765 | Not Available | + | 399030 - 401060 | 76279.6 |
| hypothetical protein | PFL_RS01770 | Not Available | + | 401419 - 401739 | 11905.7 |
| hypothetical protein | PFL_RS01775 | Not Available | - | 401822 - 402232 | 15181.6 |
| iclr family transcriptional regulator | PFL_RS01780 | Not Available | + | 402492 - 403217 | 26522.2 |
| formimidoylglutamase | PFL_RS01785 | Not Available | + | 403236 - 404174 | 34040.7 |
| sodium/glutamate symporter | PFL_RS01790 | Not Available | + | 404227 - 405435 | 42328.5 |
| alpha/beta fold hydrolase | PFL_RS01795 | Not Available | - | 405436 - 406413 | 36103.8 |
| hypothetical protein | PFL_RS01800 | Not Available | - | 406463 - 406792 | 11983.0 |
| isochorismate lyase | PFL_RS01805 | Not Available | + | 406915 - 407256 | 12610.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


