Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS01610 | Not Available | - | 365204 - 366052 | 32808.9 |
| hypothetical protein | PFL_RS01615 | Not Available | + | 366190 - 366855 | 23923.8 |
| tetratricopeptide repeat protein | PFL_RS01620 | Not Available | + | 366861 - 367556 | 25795.7 |
| lysozyme inhibitor lpri family protein | PFL_RS01625 | Not Available | - | 367629 - 368750 | 41431.9 |
| cytochrome c family protein | PFL_RS01630 | Not Available | - | 368775 - 369161 | 13870.8 |
| hypothetical protein | PFL_RS01635 | Not Available | - | 369241 - 370035 | 28338.6 |
| phosphatase pap2 family protein | PFL_RS01640 | Not Available | - | 370049 - 370876 | 28981.4 |
| mipa/ompv family protein | PFL_RS01645 | Not Available | - | 370912 - 371763 | 30327.1 |
| duf1254 domain-containing protein | PFL_RS01650 | Not Available | - | 371977 - 373011 | 37719.5 |
| arac family transcriptional regulator | PFL_RS01655 | Not Available | - | 373173 - 374156 | 36384.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


