Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | PFL_RS01360 | Not Available | + | 309241 - 309561 | 11837.1 |
| alpha/beta fold hydrolase | PFL_RS01365 | Not Available | + | 309580 - 311559 | 74082.0 |
| rubredoxin | PFL_RS01370 | Not Available | + | 311597 - 311794 | 7173.42 |
| alpha/beta hydrolase | PFL_RS01375 | Not Available | + | 311997 - 312758 | 28218.0 |
| dihydrolipoyl dehydrogenase | PFL_RS01380 | Not Available | + | 312755 - 314209 | 50262.6 |
| taurine dioxygenase | PFL_RS01385 | Not Available | - | 314267 - 315106 | 31555.5 |
| taurine abc transporter permease tauc | PFL_RS01390 | Not Available | - | 315368 - 316207 | 29667.3 |
| taurine abc transporter atp-binding subunit | PFL_RS01395 | Not Available | - | 316204 - 316998 | 28907.0 |
| taurine abc transporter substrate-binding protein | PFL_RS01400 | Not Available | - | 317026 - 318003 | 34498.4 |
| glutamate--cysteine ligase | PFL_RS01405 | Not Available | - | 318173 - 319756 | 59234.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


