Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | PFL_RS01310 | Not Available | - | 294956 - 296002 | 37399.9 |
| tonb-dependent receptor | PFL_RS01315 | Not Available | + | 296208 - 298466 | 82002.7 |
| llm class flavin-dependent oxidoreductase | PFL_RS01320 | Not Available | + | 298610 - 299938 | 48448.3 |
| l-glyceraldehyde 3-phosphate reductase | PFL_RS01325 | Not Available | + | 300088 - 301125 | 38098.1 |
| hlyd family secretion protein | PFL_RS01330 | Not Available | - | 301221 - 302408 | 42485.4 |
| dha2 family efflux mfs transporter permease subunit | PFL_RS01335 | Not Available | + | 302486 - 304081 | 57287.0 |
| glxa family transcriptional regulator | PFL_RS01340 | Not Available | - | 304096 - 305142 | 39040.9 |
| fatty acyl-amp ligase | PFL_RS01345 | Not Available | + | 305514 - 307295 | 64198.0 |
| acyl-coa desaturase | PFL_RS01350 | Not Available | + | 307292 - 308200 | 33553.8 |
| acyl-coa desaturase | PFL_RS01355 | Not Available | + | 308232 - 309188 | 35914.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


