Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | PFL_RS01210 | Not Available | - | 271089 - 272285 | 43693.5 |
| efflux rnd transporter periplasmic adaptor subunit | PFL_RS01215 | Not Available | + | 272560 - 273654 | 38445.1 |
| efflux rnd transporter periplasmic adaptor subunit | PFL_RS01220 | Not Available | + | 273651 - 274721 | 38234.4 |
| efflux rnd transporter permease subunit | PFL_RS01225 | Not Available | + | 274718 - 277804 | 113589.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | PFL_RS01230 | Not Available | - | 277979 - 278605 | 23329.4 |
| methionine abc transporter permease | PFL_RS01235 | Not Available | - | 278758 - 279402 | 22982.0 |
| methionine abc transporter atp-binding protein | PFL_RS01240 | Not Available | - | 279392 - 280516 | 41181.0 |
| metq/nlpa family abc transporter substrate-binding protein | PFL_RS01245 | Not Available | - | 280518 - 281327 | 29074.1 |
| llm class flavin-dependent oxidoreductase | PFL_RS01250 | Not Available | - | 281440 - 282807 | 51263.4 |
| sfnb family sulfur acquisition oxidoreductase | PFL_RS01255 | Not Available | - | 282807 - 284006 | 43569.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


