Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS06255 | Not Available | + | 1406976 - 1407170 | 7363.74 |
| quorum-sensing-regulated virulence factor family protein | PFL_RS06260 | Not Available | - | 1407171 - 1407596 | 15618.9 |
| Putative dna-binding response regulator | PFL_RS09950 | Not Available | + | 2203108 - 2204292 | 43425.4 |
| anti-sigma factor antagonist rssc | PFL_RS09955 | Not Available | + | 2204289 - 2204771 | 17824.6 |
| Transaldolase | PFL_RS09960 | Not Available | - | 2204845 - 2205771 | 33757.4 |
| trna dihydrouridine(20/20a) synthase dusa | PFL_RS09965 | Not Available | - | 2205949 - 2206959 | 36978.6 |
| Attl | Not Available | Not Available | + | 2206875 - 2206893 | Not Available |
| Putative integrase | PFL_RS09970 | Not Available | + | 2207060 - 2208202 | 43929.4 |
| Putative transcriptional regulator | PFL_RS09975 | Not Available | - | 2208171 - 2208452 | 10325.7 |
| hypothetical protein | PFL_RS09980 | Not Available | - | 2208449 - 2208922 | 16914.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


