Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | PFL_RS01060 | Not Available | - | 240502 - 242112 | 59939.1 |
| abc transporter atp-binding protein | PFL_RS01065 | Not Available | - | 242127 - 242942 | 29991.4 |
| abc transporter permease | PFL_RS01070 | Not Available | - | 242939 - 244534 | 57792.8 |
| abc transporter substrate-binding protein | PFL_RS01075 | Not Available | + | 244903 - 245925 | 35956.5 |
| lysr family transcriptional regulator | PFL_RS01080 | Not Available | - | 246077 - 246997 | 33727.6 |
| taud/tfda family dioxygenase | PFL_RS01085 | Not Available | + | 247181 - 248086 | 33258.0 |
| alkaline phosphatase family protein | PFL_RS01090 | Not Available | - | 248245 - 249861 | 61361.3 |
| lysr family transcriptional regulator | PFL_RS01095 | Not Available | - | 250103 - 251047 | 34843.7 |
| tonb-dependent receptor | PFL_RS01100 | Not Available | + | 251202 - 253574 | 85408.9 |
| aryl-sulfate sulfotransferase | PFL_RS01105 | Not Available | + | 253641 - 254978 | 48275.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


