Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate/molybdate abc transporter atp-binding protein | PFL_RS01010 | Not Available | + | 231557 - 232546 | 37033.3 |
| duf962 domain-containing protein | PFL_RS01015 | Not Available | - | 232688 - 233212 | 19017.8 |
| crp/fnr family transcriptional regulator | PFL_RS01020 | Not Available | + | 233315 - 234001 | 25700.4 |
| hydroxyisourate hydrolase | PFL_RS01025 | Not Available | - | 234271 - 234681 | 14974.0 |
| heme-binding protein | PFL_RS01030 | Not Available | - | 234781 - 235269 | 16246.7 |
| heavy metal response regulator transcription factor | PFL_RS01035 | Not Available | + | 235406 - 236086 | 25438.9 |
| heavy metal sensor histidine kinase | PFL_RS01040 | Not Available | + | 236073 - 237461 | 50875.5 |
| arac family transcriptional regulator | PFL_RS01045 | Not Available | - | 237578 - 238582 | 37578.7 |
| fatty acid desaturase | PFL_RS01050 | Not Available | + | 238682 - 239755 | 40419.4 |
| pesticin immunity protein | PFL_RS01055 | Not Available | + | 239869 - 240315 | 16057.2 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


