Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS00910 | Not Available | + | 213839 - 214024 | 6782.72 |
| hypothetical protein | PFL_RS00915 | Not Available | - | 214043 - 214507 | 18175.3 |
| hypothetical protein | PFL_RS00920 | Not Available | - | 214491 - 215342 | 32945.6 |
| Trna-arg | Not Available | Not Available | + | 215506 - 215582 | Not Available |
| rna polymerase sigma factor | PFL_RS00930 | Not Available | + | 215771 - 216313 | 20573.1 |
| rebb family r body protein | PFL_RS00935 | Not Available | + | 216433 - 216660 | 7690.2 |
| hypothetical protein | PFL_RS00940 | Not Available | + | 216685 - 217353 | 21768.5 |
| hypothetical protein | PFL_RS00945 | Not Available | + | 217495 - 218052 | 19578.4 |
| rebb family r body protein | PFL_RS00950 | Not Available | + | 218166 - 218480 | 10823.8 |
| rebb family r body protein | PFL_RS00955 | Not Available | + | 218535 - 218849 | 10717.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


