Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase/transferase family protein | PFL_RS00575 | Not Available | - | 113669 - 115162 | 53788.7 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | PFL_RS00580 | Not Available | - | 115342 - 116778 | 49929.1 |
| nad(p) transhydrogenase subunit alpha | PFL_RS00585 | Not Available | - | 116778 - 117101 | 11468.6 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | PFL_RS00590 | Not Available | - | 117117 - 118238 | 38825.0 |
| lysr family transcriptional regulator | PFL_RS00595 | Not Available | - | 118690 - 119589 | 33863.8 |
| acyl-coa dehydrogenase | PFL_RS00600 | Not Available | + | 119749 - 120930 | 43162.9 |
| caib/baif coa-transferase family protein | PFL_RS00605 | Not Available | + | 120944 - 122164 | 43500.2 |
| 16s ribosomal rna | Not Available | Not Available | + | 122811 - 124349 | Not Available |
| Trna-ile | Not Available | Not Available | + | 124473 - 124549 | Not Available |
| Trna-ala | Not Available | Not Available | + | 124560 - 124635 | Not Available |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


