Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c5 family protein | PFL_RS00425 | Not Available | + | 82818 - 83108 | 10623.8 |
| cytochrome c | PFL_RS00430 | Not Available | + | 83154 - 83759 | 20769.7 |
| thiol:disulfide interchange protein dsba/dsbl | PFL_RS00435 | Not Available | + | 83957 - 84586 | 22524.3 |
| endonuclease/exonuclease/phosphatase family protein | PFL_RS00440 | Not Available | + | 84599 - 85477 | 32525.2 |
| ggdef domain-containing protein | PFL_RS00445 | Not Available | + | 85474 - 87657 | 79365.8 |
| n-acetylmuramoyl-l-alanine amidase | PFL_RS00450 | Not Available | + | 87759 - 88538 | 28764.3 |
| eal domain-containing protein | PFL_RS00455 | Not Available | + | 88615 - 90234 | 59902.8 |
| kinb sensor domain-containing domain | PFL_RS00460 | Not Available | - | 90239 - 92023 | 66162.0 |
| sigma-54-dependent response regulator transcription factor algb | PFL_RS00465 | Not Available | - | 92034 - 93380 | 49651.3 |
| hypothetical protein | PFL_RS00470 | Not Available | + | 93822 - 94106 | 10712.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


