Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | PFL_RS00325 | Not Available | + | 63288 - 64175 | 33260.9 |
| twin transmembrane helix small protein | PFL_RS00330 | Not Available | - | 64182 - 64385 | 7180.08 |
| surf1 family protein | PFL_RS00335 | Not Available | + | 64456 - 65196 | 27594.1 |
| hypothetical protein | PFL_RS00340 | Not Available | + | 65162 - 65752 | 22012.6 |
| heme a synthase | PFL_RS00345 | Not Available | + | 65763 - 66842 | 39053.7 |
| heme o synthase | PFL_RS00350 | Not Available | + | 66830 - 67732 | 33008.4 |
| sco family protein | PFL_RS00355 | Not Available | + | 67729 - 68364 | 23053.2 |
| metq/nlpa family abc transporter substrate-binding protein | PFL_RS00360 | Not Available | - | 68548 - 69321 | 27881.8 |
| methionine abc transporter permease | PFL_RS00365 | Not Available | - | 69381 - 70046 | 23715.0 |
| methionine abc transporter atp-binding protein | PFL_RS00370 | Not Available | - | 70046 - 71053 | 36744.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


