Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | PFL_RS00275 | Not Available | + | 51318 - 53102 | 65231.2 |
| cytochrome c | PFL_RS00280 | Not Available | + | 53115 - 54419 | 46121.2 |
| hypothetical protein | PFL_RS00285 | Not Available | - | 54465 - 54821 | 12997.4 |
| pa0069 family radical sam protein | PFL_RS00290 | Not Available | + | 55021 - 56079 | 39310.5 |
| carbonic anhydrase | PFL_RS00295 | Not Available | + | 56323 - 57057 | 26624.8 |
| sulp family inorganic anion transporter | PFL_RS00300 | Not Available | + | 57149 - 58684 | 53551.2 |
| hypothetical protein | PFL_RS00305 | Not Available | - | 58768 - 59418 | 24015.7 |
| cytochrome c oxidase subunit ii | PFL_RS00310 | Not Available | + | 59792 - 60919 | 41849.7 |
| cytochrome c oxidase subunit i | PFL_RS00315 | Not Available | + | 61002 - 62597 | 58886.2 |
| cytochrome c oxidase assembly protein | PFL_RS00320 | Not Available | + | 62697 - 63254 | 20491.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


