Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PFL_RS33305 | Not Available | + | 4382440 - 4383309 | 31074.0 |
| hypothetical protein | PFL_RS19180 | Not Available | + | 4384141 - 4384341 | 7230.63 |
| hypothetical protein | PFL_RS19185 | Not Available | + | 4384849 - 4385280 | 16040.9 |
| hypothetical protein | PFL_RS19190 | Not Available | + | 4385277 - 4385468 | 7131.45 |
| hypothetical protein | PFL_RS19195 | Not Available | + | 4385465 - 4385665 | 7667.06 |
| Hypothetical protein | PFL_RS33110 | Not Available | + | 4385662 - 4385835 | 6075.45 |
| Hypothetical protein | PFL_RS19200 | Not Available | + | 4385975 - 4386721 | 27802.8 |
| chromosomal replication initiator protein dnaa | PFL_RS00005 | Not Available | + | 101 - 1642 | 57207.4 |
| dna polymerase iii subunit beta | PFL_RS00010 | Not Available | + | 1681 - 2784 | 40586.0 |
| dna replication/repair protein recf | PFL_RS00015 | Not Available | + | 2805 - 3908 | 41670.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


