Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | PFL_RS19120 | Not Available | - | 4375704 - 4376678 | 36043.4 |
| Putative dna-binding protein (roi) | PFL_RS19130 | Not Available | - | 4377096 - 4377899 | 30427.5 |
| hypothetical protein | PFL_RS32835 | Not Available | - | 4377902 - 4378354 | 16883.7 |
| hypothetical protein | PFL_RS32840 | Not Available | - | 4378344 - 4378748 | 14627.4 |
| Regulatory cii-like protein | PFL_RS19140 | Not Available | - | 4378751 - 4379173 | 15198.2 |
| Cro protein | PFL_RS19145 | Not Available | - | 4379256 - 4379459 | 7304.85 |
| Transcriptional regulator | PFL_RS19150 | Not Available | + | 4379576 - 4380364 | 29193.6 |
| duf4410 domain-containing protein | PFL_RS19155 | Not Available | + | 4380420 - 4380965 | 19221.8 |
| hypothetical protein | PFL_RS19160 | Not Available | + | 4381010 - 4381246 | 8746.44 |
| St313-td protein | PFL_RS19165 | Not Available | + | 4381398 - 4382315 | 34954.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


