Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | PFL_RS18920 | Not Available | - | 4343541 - 4346630 | 112318.0 |
| Tail component protein gp18 | PFL_RS18925 | Not Available | - | 4346688 - 4347269 | 20381.8 |
| Hypothetical protein | PFL_RS18930 | Not Available | - | 4347322 - 4347741 | 14391.6 |
| Hypothetical protein | PFL_RS18935 | Not Available | - | 4347840 - 4348646 | 29127.1 |
| Hypothetical protein | PFL_RS18940 | Not Available | - | 4348643 - 4349617 | 36288.7 |
| Hypothetical protein | PFL_RS32105 | Not Available | + | 4349875 - 4350303 | 15833.8 |
| hiran domain-containing protein | PFL_RS31660 | Not Available | + | 4350411 - 4351133 | 25711.5 |
| duf6338 family protein | PFL_RS18955 | Not Available | - | 4351350 - 4351940 | 22442.5 |
| hypothetical protein | PFL_RS18960 | Not Available | + | 4352112 - 4352741 | 24222.6 |
| Tail protein | PFL_RS18965 | Not Available | - | 4352798 - 4353562 | 28638.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


