Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| L-shaped tail fiber protein | PFL_RS10710 | Not Available | + | 2341690 - 2341923 | 8460.06 |
| Acyltransferase | PFL_RS10715 | Not Available | + | 2342156 - 2343202 | 38799.6 |
| Minor tail protein | PFL_RS33240 | Not Available | + | 2343240 - 2344091 | 31779.5 |
| Tail protein | PFL_RS33245 | Not Available | + | 2344127 - 2344513 | 14646.5 |
| hypothetical protein | PFL_RS32630 | Not Available | + | 2344592 - 2345038 | 16330.8 |
| Rz-like phage lysis protein | PFL_RS33250 | Not Available | + | 2345493 - 2346008 | 18287.8 |
| Hypothetical protein | PFL_RS10740 | Not Available | - | 2347171 - 2347848 | 25125.7 |
| Attr | Not Available | Not Available | + | 2358653 - 2358664 | Not Available |
| Rz-like phage lysis protein | PFL_RS18905 | Not Available | - | 4341320 - 4341841 | 19114.9 |
| Capsid and scaffold protein | PFL_RS18910 | Not Available | - | 4341838 - 4342284 | 16177.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


