Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | PFL_RS03255 | Not Available | - | 749742 - 750752 | 34961.9 |
| abc transporter substrate-binding protein | PFL_RS03260 | Not Available | - | 750749 - 751708 | 35135.3 |
| abc transporter atp-binding protein | PFL_RS03265 | Not Available | - | 751705 - 752493 | 28993.9 |
| tonb-dependent siderophore receptor | PFL_RS03270 | Not Available | - | 752535 - 754664 | 78808.3 |
| pepsy domain-containing protein | PFL_RS03275 | Not Available | - | 754820 - 756202 | 51334.3 |
| tonb-dependent copper receptor | PFL_RS03280 | Not Available | - | 756302 - 758434 | 76805.2 |
| duf2946 domain-containing protein | PFL_RS03285 | Not Available | - | 758523 - 758933 | 14786.1 |
| copper chaperone pcu(a)c | PFL_RS03290 | Not Available | - | 758989 - 759483 | 17683.5 |
| duf2946 domain-containing protein | PFL_RS03295 | Not Available | - | 759533 - 759931 | 14347.3 |
| addiction module antidote protein | PFL_RS03300 | Not Available | - | 760032 - 760322 | 10424.5 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


