Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS03155 | Not Available | + | 731401 - 732105 | 26441.4 |
| hypothetical protein | PFL_RS03160 | Not Available | + | 732178 - 732639 | 16753.2 |
| hypothetical protein | PFL_RS03165 | Not Available | + | 732795 - 733514 | 26644.5 |
| ai-2e family transporter | PFL_RS03170 | Not Available | + | 733640 - 734650 | 36521.6 |
| hsp70 family protein | PFL_RS03175 | Not Available | - | 734717 - 735982 | 46272.1 |
| dnaj c-terminal domain-containing protein | PFL_RS03180 | Not Available | + | 736280 - 737221 | 34192.4 |
| chaperone modulator cbpm | PFL_RS03185 | Not Available | + | 737245 - 737547 | 11568.0 |
| sensor histidine kinase kdpd | PFL_RS03190 | Not Available | - | 737757 - 738890 | 40890.7 |
| urease subunit alpha | PFL_RS03195 | Not Available | - | 738989 - 740689 | 60646.6 |
| urease subunit beta | PFL_RS03200 | Not Available | - | 740798 - 741103 | 11219.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


