Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin | PFL_RS03105 | Not Available | - | 713816 - 714346 | 20128.6 |
| lysr substrate-binding domain-containing protein | PFL_RS03110 | Not Available | - | 714457 - 715380 | 34058.5 |
| fmn-dependent nadh-azoreductase | PFL_RS03115 | Not Available | + | 715506 - 716144 | 22953.3 |
| multidrug efflux smr transporter | PFL_RS03120 | Not Available | + | 716157 - 716462 | 10608.5 |
| triacylglycerol lipase | PFL_RS03125 | Not Available | + | 716583 - 717473 | 32429.0 |
| dmt family transporter | PFL_RS03130 | Not Available | - | 717476 - 718381 | 32217.2 |
| helix-turn-helix transcriptional regulator | PFL_RS03135 | Not Available | + | 718478 - 719266 | 29436.1 |
| psif family protein | PFL_RS03140 | Not Available | + | 719338 - 719637 | 10574.2 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | PFL_RS03145 | Not Available | + | 719883 - 721586 | 63693.0 |
| hemagglutinin repeat-containing protein | PFL_RS03150 | Not Available | + | 721607 - 731257 | 332702.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


