Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-amp phosphodiesterase | PFL_RS02755 | Not Available | + | 633320 - 634135 | 30151.8 |
| yqia/ycfp family alpha/beta fold hydrolase | PFL_RS02760 | Not Available | + | 634203 - 634811 | 22189.3 |
| dna topoisomerase iv subunit b | PFL_RS02765 | Not Available | + | 634854 - 636758 | 69456.0 |
| esterase-like activity of phytase family protein | PFL_RS02770 | Not Available | + | 636758 - 637741 | 35417.2 |
| tigr02281 family clan aa aspartic protease | PFL_RS02775 | Not Available | + | 637738 - 638259 | 18701.4 |
| dna topoisomerase iv subunit a | PFL_RS02780 | Not Available | + | 638267 - 640525 | 83353.1 |
| membrane integrity-associated transporter subunit pqic | PFL_RS02785 | Not Available | + | 640705 - 641415 | 25322.6 |
| ahpa/ytjb family protein | PFL_RS02790 | Not Available | - | 641645 - 643171 | 56350.7 |
| phosphoserine phosphatase serb | PFL_RS02795 | Not Available | + | 643305 - 644519 | 43980.1 |
| archaetidylserine decarboxylase | PFL_RS02800 | Not Available | - | 644591 - 645457 | 31750.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


