Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | PFL_RS02510 | Not Available | - | 567157 - 568959 | 65995.8 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | PFL_RS02515 | Not Available | - | 569237 - 573190 | 142700.0 |
| hypothetical protein | PFL_RS32545 | Not Available | + | 573272 - 573529 | 9574.69 |
| sodium/proline symporter putp | PFL_RS02520 | Not Available | + | 573654 - 575138 | 52912.6 |
| duf2165 family protein | PFL_RS02525 | Not Available | - | 575323 - 575817 | 18348.5 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | PFL_RS02530 | Not Available | - | 575926 - 577197 | 45559.6 |
| glycerol kinase | PFL_RS02535 | Not Available | - | 577447 - 578871 | 50907.4 |
| nad(p)/fad-dependent oxidoreductase | PFL_RS02540 | Not Available | - | 578874 - 580130 | 45041.0 |
| nad(p)/fad-dependent oxidoreductase | PFL_RS02545 | Not Available | - | 580117 - 581523 | 50882.2 |
| deor/glpr family dna-binding transcription regulator | PFL_RS02550 | Not Available | - | 581681 - 582445 | 28126.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


