Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | PFL_RS02360 | Not Available | - | 533608 - 534804 | 42036.0 |
| hypothetical protein | PFL_RS02365 | Not Available | - | 534801 - 535286 | 17999.8 |
| class i sam-dependent methyltransferase | PFL_RS02370 | Not Available | - | 535283 - 536044 | 29260.9 |
| nad(p)/fad-dependent oxidoreductase | PFL_RS02375 | Not Available | - | 536041 - 537288 | 46119.5 |
| hypothetical protein | PFL_RS02380 | Not Available | - | 537275 - 538465 | 43171.9 |
| mmpl family transporter | PFL_RS02385 | Not Available | - | 538459 - 540801 | 84513.2 |
| outer membrane lipoprotein carrier protein lola | PFL_RS02390 | Not Available | - | 540785 - 541465 | 25207.7 |
| thioesterase family protein | PFL_RS02395 | Not Available | - | 541462 - 541887 | 16020.4 |
| histidine ammonia-lyase | PFL_RS02400 | Not Available | - | 541880 - 543424 | 56261.6 |
| glycosyl transferase | PFL_RS02405 | Not Available | - | 543405 - 544361 | 36864.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


