Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | PFL_RS31490 | Not Available | - | 7054411 - 7055778 | 48576.3 |
| f0f1 atp synthase subunit epsilon | PFL_RS31495 | Not Available | - | 7055894 - 7056319 | 14805.8 |
| f0f1 atp synthase subunit beta | PFL_RS31500 | Not Available | - | 7056365 - 7057741 | 49489.2 |
| f0f1 atp synthase subunit gamma | PFL_RS31505 | Not Available | - | 7057769 - 7058629 | 31440.1 |
| f0f1 atp synthase subunit alpha | PFL_RS31510 | Not Available | - | 7058680 - 7060224 | 55360.4 |
| f0f1 atp synthase subunit delta | PFL_RS31515 | Not Available | - | 7060246 - 7060782 | 19201.9 |
| f0f1 atp synthase subunit b | PFL_RS31520 | Not Available | - | 7060795 - 7061265 | 16935.4 |
| f0f1 atp synthase subunit c | PFL_RS32405 | Not Available | - | 7061323 - 7061580 | 8609.06 |
| f0f1 atp synthase subunit a | PFL_RS31530 | Not Available | - | 7061713 - 7062585 | 31699.5 |
| f0f1 atp synthase subunit i | PFL_RS31535 | Not Available | - | 7062602 - 7063009 | 14765.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


