Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | PFL_RS02310 | Not Available | + | 524422 - 525840 | 51749.1 |
| uroporphyrinogen decarboxylase | PFL_RS02315 | Not Available | + | 526070 - 527137 | 38941.8 |
| mfs transporter | PFL_RS02320 | Not Available | - | 527274 - 528533 | 44595.9 |
| lysr family transcriptional regulator | PFL_RS02325 | Not Available | + | 528652 - 529551 | 32760.9 |
| hypothetical protein | PFL_RS02330 | Not Available | - | 529519 - 530010 | 17468.3 |
| hypothetical protein | PFL_RS02335 | Not Available | - | 530203 - 530649 | 15511.8 |
| hypothetical protein | PFL_RS02340 | Not Available | - | 530712 - 531161 | 17228.8 |
| beta-ketoacyl-acp synthase | PFL_RS02345 | Not Available | - | 531187 - 532413 | 43749.9 |
| 3-oxoacyl-acp reductase fabg | PFL_RS02350 | Not Available | - | 532413 - 533141 | 25775.2 |
| hotdog family protein | PFL_RS02355 | Not Available | - | 533138 - 533611 | 17066.4 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


