Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3142 domain-containing protein | PFL_RS31440 | Not Available | - | 7043298 - 7044500 | 43732.6 |
| pyridoxamine 5'-phosphate oxidase family protein | PFL_RS31445 | Not Available | - | 7044718 - 7046757 | 73888.2 |
| glutathione s-transferase family protein | PFL_RS31450 | Not Available | - | 7046781 - 7047410 | 22460.1 |
| lysr family transcriptional regulator | PFL_RS31455 | Not Available | - | 7047537 - 7048439 | 32551.3 |
| hypothetical protein | PFL_RS31460 | Not Available | - | 7048510 - 7048830 | 12272.8 |
| paar domain-containing protein | PFL_RS33430 | Not Available | + | 7049182 - 7050408 | 41695.8 |
| hypothetical protein | PFL_RS31470 | Not Available | + | 7050414 - 7050875 | 17542.9 |
| hypothetical protein | PFL_RS31475 | Not Available | + | 7051157 - 7051543 | 14751.3 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | PFL_RS31480 | Not Available | - | 7051637 - 7053469 | 66312.0 |
| deor/glpr family dna-binding transcription regulator | PFL_RS31485 | Not Available | - | 7053480 - 7054250 | 28179.0 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


