Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | PFL_RS31340 | Not Available | + | 7020422 - 7022311 | 71428.1 |
| duf3617 domain-containing protein | PFL_RS31345 | Not Available | - | 7022359 - 7022883 | 18923.9 |
| cardiolipin synthase | PFL_RS31350 | Not Available | + | 7023015 - 7024454 | 53999.5 |
| c17 cyclopropane fatty acid synthase cfab | PFL_RS31355 | Not Available | - | 7024464 - 7025651 | 44220.5 |
| dna-binding domain-containing protein | PFL_RS31360 | Not Available | - | 7025736 - 7026524 | 29642.5 |
| duf692 domain-containing protein | PFL_RS31365 | Not Available | - | 7026515 - 7027360 | 32010.8 |
| membrane protein | PFL_RS31370 | Not Available | - | 7027426 - 7027677 | 8258.95 |
| cation-translocating p-type atpase | PFL_RS31375 | Not Available | - | 7027796 - 7029700 | 66372.3 |
| protease modulator hflk | PFL_RS31380 | Not Available | - | 7029697 - 7030755 | 37912.3 |
| protease modulator hflc | PFL_RS31385 | Not Available | - | 7030752 - 7031792 | 37751.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


