Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tim44 domain-containing protein | PFL_RS31240 | Not Available | + | 7002226 - 7003101 | 30947.9 |
| smi1/knr4 family protein | PFL_RS31245 | Not Available | + | 7003238 - 7003645 | 15584.1 |
| cation:proton antiporter | PFL_RS31250 | Not Available | - | 7003717 - 7005480 | 64022.4 |
| acyl-coa thioesterase | PFL_RS31255 | Not Available | + | 7005770 - 7006255 | 18193.8 |
| apc family permease | PFL_RS31260 | Not Available | + | 7006510 - 7007922 | 49545.4 |
| pyridoxal kinase pdxy | PFL_RS31265 | Not Available | - | 7007930 - 7008802 | 31265.9 |
| duf3301 domain-containing protein | PFL_RS31270 | Not Available | + | 7008920 - 7009312 | 14929.0 |
| gtp-binding protein | PFL_RS31275 | Not Available | - | 7009334 - 7010296 | 34967.1 |
| duf1826 domain-containing protein | PFL_RS31280 | Not Available | - | 7010442 - 7011143 | 25467.8 |
| zinc metallochaperone gtpase ziga | PFL_RS31285 | Not Available | - | 7011143 - 7012351 | 45261.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


