Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | PFL_RS31145 | Not Available | + | 6978942 - 6979973 | 37461.9 |
| polyamine abc transporter substrate-binding protein | PFL_RS31150 | Not Available | + | 6979986 - 6981086 | 40644.9 |
| yeee/yede family protein | PFL_RS31155 | Not Available | - | 6981200 - 6982411 | 42032.3 |
| plp-dependent aminotransferase family protein | PFL_RS31160 | Not Available | - | 6982451 - 6984001 | 56050.4 |
| fmn-binding negative transcriptional regulator | PFL_RS31165 | Not Available | + | 6984107 - 6984730 | 22441.9 |
| gnat family n-acetyltransferase | PFL_RS31170 | Not Available | + | 6984761 - 6985207 | 17121.2 |
| gnat family n-acetyltransferase | PFL_RS31175 | Not Available | + | 6985227 - 6985898 | 24807.3 |
| homocysteine s-methyltransferase family protein | PFL_RS31180 | Not Available | - | 6985982 - 6986881 | 31737.6 |
| abc transporter substrate-binding protein | PFL_RS31185 | Not Available | + | 6986992 - 6987813 | 29958.6 |
| amino acid abc transporter permease | PFL_RS31190 | Not Available | + | 6987810 - 6988646 | 30295.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


