Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f390 synthetase-related protein | PFL_RS31095 | Not Available | + | 6965341 - 6966699 | 50906.0 |
| atp-grasp domain-containing protein | PFL_RS31100 | Not Available | + | 6966687 - 6967841 | 42539.9 |
| hypothetical protein | PFL_RS31105 | Not Available | + | 6967838 - 6968977 | 43034.8 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | PFL_RS31110 | Not Available | + | 6968974 - 6969990 | 38548.1 |
| sodium:alanine symporter family protein | PFL_RS31115 | Not Available | + | 6970423 - 6971862 | 51352.3 |
| asparaginase | PFL_RS31120 | Not Available | + | 6971967 - 6972968 | 34834.0 |
| hypothetical protein | PFL_RS31125 | Not Available | - | 6973034 - 6973579 | 18970.5 |
| arac family transcriptional regulator | PFL_RS31130 | Not Available | + | 6973778 - 6974770 | 36842.2 |
| ankyrin repeat domain-containing protein | PFL_RS31135 | Not Available | + | 6974841 - 6976754 | 71513.0 |
| ankyrin repeat domain-containing protein | PFL_RS31140 | Not Available | + | 6976864 - 6978777 | 71416.6 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


