Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate signaling complex protein phou | PFL_RS30995 | Not Available | - | 6943478 - 6944239 | 28633.2 |
| phosphate abc transporter atp-binding protein pstb | PFL_RS31000 | Not Available | - | 6944361 - 6945194 | 31064.4 |
| phosphate abc transporter permease psta | PFL_RS31005 | Not Available | - | 6945380 - 6947050 | 60764.2 |
| abc transporter permease subunit | PFL_RS31010 | Not Available | - | 6947066 - 6949099 | 74045.5 |
| phosphate abc transporter substrate-binding protein psts | PFL_RS31015 | Not Available | - | 6949588 - 6950571 | 34719.6 |
| mfs transporter | PFL_RS31020 | Not Available | - | 6950809 - 6952098 | 46568.5 |
| acyl-coa thioesterase | PFL_RS31025 | Not Available | + | 6952502 - 6952906 | 14513.5 |
| d-hexose-6-phosphate mutarotase | PFL_RS31030 | Not Available | + | 6952965 - 6953864 | 33258.4 |
| duf3299 domain-containing protein | PFL_RS31035 | Not Available | - | 6954040 - 6954576 | 19470.8 |
| glsb/yeaq/ymge family stress response membrane protein | PFL_RS31040 | Not Available | - | 6954714 - 6954959 | 8187.47 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


