Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chorismate lyase | PFL_RS30945 | Not Available | + | 6934486 - 6935049 | 20902.0 |
| 4-hydroxybenzoate octaprenyltransferase | PFL_RS30950 | Not Available | + | 6935049 - 6935939 | 32971.6 |
| hypothetical protein | PFL_RS30955 | Not Available | - | 6936056 - 6936439 | 13761.8 |
| phosphate regulon transcriptional regulator phob | PFL_RS30960 | Not Available | + | 6936591 - 6937280 | 25615.0 |
| phosphate regulon sensor histidine kinase phor | PFL_RS30965 | Not Available | + | 6937409 - 6938701 | 48786.3 |
| hemolysin family protein | PFL_RS30970 | Not Available | + | 6938819 - 6940159 | 50057.3 |
| m23 family metallopeptidase | PFL_RS30975 | Not Available | - | 6940197 - 6941093 | 32322.7 |
| helix-turn-helix domain-containing protein | PFL_RS30980 | Not Available | - | 6941155 - 6941469 | 11369.7 |
| type ii toxin-antitoxin system rele/pare family toxin | PFL_RS30985 | Not Available | - | 6941462 - 6941797 | 12743.2 |
| response regulator | PFL_RS30990 | Not Available | - | 6942358 - 6943311 | 33763.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


