Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dcrb-related protein | PFL_RS30895 | Not Available | + | 6924978 - 6925403 | 15603.9 |
| rhs repeat-associated core domain-containing protein | PFL_RS30900 | Not Available | + | 6925413 - 6929873 | 164922.0 |
| hypothetical protein | PFL_RS30905 | Not Available | + | 6929889 - 6930515 | 23338.2 |
| hypothetical protein | PFL_RS30910 | Not Available | - | 6930535 - 6930798 | 10026.0 |
| dcrb-related protein | PFL_RS30915 | Not Available | - | 6930853 - 6931287 | 16226.3 |
| hypothetical protein | PFL_RS30920 | Not Available | - | 6931399 - 6931770 | 13682.1 |
| hypothetical protein | PFL_RS30925 | Not Available | - | 6931758 - 6932282 | 19119.6 |
| hu family dna-binding protein | PFL_RS30930 | Not Available | - | 6932447 - 6932722 | 9834.89 |
| nad(p)/fad-dependent oxidoreductase | PFL_RS30935 | Not Available | - | 6932912 - 6934060 | 40145.9 |
| rubredoxin | PFL_RS30940 | Not Available | - | 6934103 - 6934270 | 6232.47 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


