Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS30745 | Not Available | + | 6885887 - 6886627 | 26138.7 |
| sdr family oxidoreductase | PFL_RS30750 | Not Available | - | 6886749 - 6887606 | 31116.8 |
| tonb-system energizer exbb | PFL_RS30755 | Not Available | + | 6887797 - 6888801 | 34718.1 |
| tonb system transport protein exbd | PFL_RS30760 | Not Available | + | 6888808 - 6889236 | 15253.7 |
| energy transducer tonb | PFL_RS30765 | Not Available | + | 6889233 - 6889985 | 26928.7 |
| hydrogen peroxide-inducible genes activator | PFL_RS30770 | Not Available | + | 6890134 - 6891054 | 33598.9 |
| atp-dependent dna helicase recg | PFL_RS30775 | Not Available | + | 6891064 - 6893139 | 76133.5 |
| aminoacyl-trna deacylase and hdod domain-containing protein | PFL_RS30780 | Not Available | + | 6893219 - 6894619 | 51242.0 |
| hypothetical protein | PFL_RS30785 | Not Available | - | 6894678 - 6895061 | 14398.8 |
| type vi secretion system-associated lipoprotein tagq | PFL_RS30790 | Not Available | - | 6895202 - 6896131 | 32677.3 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


