Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PFL_RS30645 | Not Available | - | 6867222 - 6868367 | 40208.6 |
| aldehyde dehydrogenase | PFL_RS30650 | Not Available | - | 6868495 - 6869988 | 52790.0 |
| cupin domain-containing protein | PFL_RS30655 | Not Available | + | 6870227 - 6870589 | 13466.8 |
| 50s ribosomal protein l33 | PFL_RS30660 | Not Available | - | 6870648 - 6870803 | 6004.39 |
| 50s ribosomal protein l28 | PFL_RS30665 | Not Available | - | 6870815 - 6871051 | 8995.05 |
| abc transporter substrate-binding protein | PFL_RS30670 | Not Available | + | 6871527 - 6873110 | 57926.8 |
| radc family protein | PFL_RS30675 | Not Available | - | 6873159 - 6873833 | 25338.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | PFL_RS30680 | Not Available | + | 6873966 - 6875174 | 42862.9 |
| dutp diphosphatase | PFL_RS30685 | Not Available | + | 6875180 - 6875635 | 16018.4 |
| phosphomannomutase/phosphoglucomutase | PFL_RS30690 | Not Available | + | 6875936 - 6877294 | 49176.9 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


