Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter six-transmembrane domain-containing protein | PFL_RS30545 | Not Available | + | 6843718 - 6844644 | 33665.7 |
| phosphatidylinositol-specific phospholipase c domain-containing protein | PFL_RS30550 | Not Available | - | 6844648 - 6845616 | 35218.0 |
| methyl-accepting chemotaxis protein | PFL_RS30555 | Not Available | - | 6845736 - 6847712 | 70389.3 |
| lysr substrate-binding domain-containing protein | PFL_RS30560 | Not Available | - | 6847905 - 6848825 | 34429.4 |
| norm family multidrug efflux mate transporter | PFL_RS30565 | Not Available | + | 6848976 - 6850382 | 49865.6 |
| bifunctional diguanylate cyclase/phosphodiesterase | PFL_RS30570 | Not Available | - | 6850401 - 6852074 | 62018.8 |
| dna helicase rep | PFL_RS30575 | Not Available | + | 6852343 - 6854352 | 76604.6 |
| xanthine phosphoribosyltransferase | PFL_RS30580 | Not Available | + | 6854409 - 6854981 | 20404.9 |
| acetyl-coa hydrolase/transferase c-terminal domain-containing protein | PFL_RS30585 | Not Available | - | 6855086 - 6857017 | 71032.1 |
| cytochrome c5 family protein | PFL_RS30590 | Not Available | - | 6857154 - 6857570 | 13867.7 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


