Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PFL_RS30445 | Not Available | + | 6826752 - 6827036 | 10688.4 |
| tigr02647 family protein | PFL_RS30450 | Not Available | + | 6827231 - 6827476 | 8706.38 |
| class i adenylate cyclase | PFL_RS30455 | Not Available | + | 6827646 - 6830492 | 108737.0 |
| nucleoside diphosphate kinase regulator | PFL_RS30460 | Not Available | - | 6830500 - 6830913 | 14863.7 |
| duf1289 domain-containing protein | PFL_RS30465 | Not Available | - | 6831056 - 6831289 | 8651.36 |
| iron donor protein cyay | PFL_RS30470 | Not Available | - | 6831294 - 6831626 | 12705.7 |
| lps translocon maturation chaperone lptm | PFL_RS32395 | Not Available | + | 6831866 - 6832024 | 5602.68 |
| diaminopimelate decarboxylase | PFL_RS30480 | Not Available | + | 6832034 - 6833281 | 45293.0 |
| diaminopimelate epimerase | PFL_RS30485 | Not Available | + | 6833286 - 6834116 | 30260.4 |
| duf484 family protein | PFL_RS30490 | Not Available | + | 6834130 - 6834855 | 26884.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


