Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | PFL_RS30345 | Not Available | - | 6807023 - 6808258 | 46882.9 |
| isoprenoid biosynthesis glyoxalase elbb | PFL_RS30350 | Not Available | + | 6808372 - 6809040 | 23150.0 |
| yaii/yqxd family protein | PFL_RS30355 | Not Available | - | 6809059 - 6809514 | 16497.9 |
| cytochrome c/ftr1 family iron permease | PFL_RS30360 | Not Available | - | 6809594 - 6811492 | 67634.2 |
| phosphomannomutase/phosphoglucomutase | PFL_RS33175 | Not Available | + | 6811630 - 6811761 | 4842.77 |
| lyse family transporter | PFL_RS30365 | Not Available | - | 6811819 - 6812451 | 22551.3 |
| mechanosensitive ion channel family protein | PFL_RS30370 | Not Available | - | 6812560 - 6813141 | 21049.4 |
| atp-binding cassette domain-containing protein | PFL_RS30375 | Not Available | - | 6813141 - 6815051 | 71021.4 |
| tigr02444 family protein | PFL_RS30380 | Not Available | + | 6815102 - 6815566 | 17131.7 |
| algp family protein | PFL_RS32385 | Not Available | - | 6815563 - 6816675 | 35874.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


