Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone oxidoreductase family protein | PFL_RS30295 | Not Available | + | 6794663 - 6795640 | 33984.1 |
| gamma-glutamylcyclotransferase | PFL_RS30300 | Not Available | - | 6795657 - 6796307 | 24616.2 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | PFL_RS30305 | Not Available | - | 6796522 - 6797490 | 35674.7 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | PFL_RS30310 | Not Available | - | 6797490 - 6798956 | 54689.1 |
| transcription termination factor rho | PFL_RS30315 | Not Available | - | 6799082 - 6800341 | 47018.2 |
| thioredoxin trxa | PFL_RS30320 | Not Available | - | 6800589 - 6800918 | 11763.2 |
| exopolyphosphatase | PFL_RS30325 | Not Available | + | 6801293 - 6802795 | 56181.5 |
| polyphosphate kinase 1 | PFL_RS30330 | Not Available | - | 6802969 - 6805188 | 83316.9 |
| porphobilinogen synthase | PFL_RS30335 | Not Available | - | 6805207 - 6806220 | 36958.3 |
| deda family protein | PFL_RS30340 | Not Available | + | 6806428 - 6807042 | 23235.8 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


