Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas protegens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas protegens Pf-5
Accession NumberNC_004129.6
Gene Summary
Adenine Count
1305352 bp
Thymine Count
1290785 bp
Guanine Count
2232065 bp
Cytosine Count
2246691 bp
Genome Length
7074893 bp
Protein-coding Genes
6201 genes
Non-Coding Genes
210 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs aminotransferase family protein | PFL_RS30205 | Not Available | + | 6775847 - 6776986 | 41199.5 |
| glycine cleavage system protein gcvh | PFL_RS30210 | Not Available | - | 6777046 - 6777429 | 13267.4 |
| glycine cleavage system aminomethyltransferase gcvt | PFL_RS30215 | Not Available | - | 6777482 - 6778564 | 39739.7 |
| iron abc transporter permease | PFL_RS30220 | Not Available | - | 6778719 - 6780335 | 58836.7 |
| extracellular solute-binding protein | PFL_RS30225 | Not Available | - | 6780576 - 6781577 | 36693.9 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | PFL_RS30230 | Not Available | - | 6781714 - 6782931 | 44334.4 |
| duf4442 domain-containing protein | PFL_RS30235 | Not Available | - | 6782941 - 6783426 | 18484.5 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | PFL_RS30240 | Not Available | - | 6783419 - 6784606 | 42998.8 |
| xaa-pro aminopeptidase | PFL_RS30245 | Not Available | - | 6784603 - 6785937 | 49412.9 |
| yeca family protein | PFL_RS30250 | Not Available | - | 6785961 - 6786518 | 19587.1 |
Pathways
26 pathways
1,6-Anhydro-N-acetylmuramic Acid Recycling
1,6-Anhydro-N-acetylmuramic Acid Recycling
Amino acid degradation
Amino acid degradation
Fatty acid degradation
Fatty acid degradation
Fatty acid degradation Pf5
Fatty acid degradation Pf5


